STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2848Transcriptional regulator, LuxR family; KEGG: geo:Geob_2049 hypothetical protein; PFAM: Protein of unknown function DUF2087; regulatory protein LuxR; SMART: regulatory protein LuxR. (248 aa)    
Predicted Functional Partners:
Bsel_2847
PFAM: AIG2 family protein; KEGG: sun:SUN_2428 hypothetical protein.
       0.728
Bsel_2845
PFAM: Silent information regulator protein Sir2; KEGG: aeh:Mlg_2040 silent information regulator protein Sir2.
       0.521
Bsel_2846
PFAM: 3D domain protein; KEGG: cvi:CV_3353 hypothetical protein.
       0.521
Bsel_2849
Putative transcriptional regulator, Crp/Fnr family; KEGG: azo:azo2882 putative transcription regulator, Nnr-type; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding.
       0.518
Bsel_0624
PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc04442 putative acetyltransferase protein.
  
     0.437
Bsel_0262
KEGG: dps:DP0608 hypothetical protein.
  
     0.416
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.