STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2865KEGG: mca:MCA1742 rhodanese-like domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein. (122 aa)    
Predicted Functional Partners:
Bsel_2864
Hypothetical protein; Belongs to the sulfur carrier protein TusA family.
  
  
 0.794
Bsel_2866
KEGG: pfl:PFL_0553 fused rhodanese domain-containing protein/phosphatidylserine decarboxylase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein.
   
 
 0.756
Bsel_0587
Rhodanese domain protein; KEGG: azo:azo2810 hypothetical protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein.
 
 
 
 0.736
Bsel_2867
TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: psa:PST_2283 outer membrane protein, putative.
 
     0.610
Bsel_2863
PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: gsu:GSU1055 hypothetical protein.
  
    0.606
Bsel_0669
KEGG: ypi:YpsIP31758_1310 pyridine nucleotide-disulphide oxidoreductase family protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SirA family protein; SMART: Rhodanese domain protein; Belongs to the sulfur carrier protein TusA family.
 
  
 0.573
Bsel_2319
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.514
Bsel_0649
Beta-lactamase domain protein; KEGG: dat:HRM2_35830 putative metallo-beta-lactamase superfamily protein; PFAM: beta-lactamase domain protein; Rhodanese domain protein; SMART: Rhodanese domain protein.
 
 
 0.491
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
   0.456
rplM
Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
   
   0.433
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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