STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2887Hypothetical protein; KEGG: tgr:Tgr7_0187 TonB-dependent receptor. (129 aa)    
Predicted Functional Partners:
Bsel_2886
PFAM: conserved hypothetical protein; KEGG: bgl:bglu_1g26170 predicted Rossmann fold nucleotide-binding protein; Belongs to the LOG family.
       0.743
Bsel_2524
Hypothetical protein.
  
     0.681
Bsel_1183
Hypothetical protein.
  
     0.670
Bsel_2259
Hypothetical protein.
  
     0.669
Bsel_2715
Hypothetical protein.
  
     0.637
Bsel_1616
Hypothetical protein.
  
     0.624
Bsel_2140
Hypothetical protein.
  
     0.613
Bsel_2297
Hypothetical protein.
  
     0.608
Bsel_1630
Hypothetical protein.
  
     0.603
Bsel_2884
Cation diffusion facilitator family transporter; KEGG: vcj:VCD_000492 cobalt-zinc-cadmium resistance protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein.
 
     0.575
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.