STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2897PFAM: regulatory protein TetR; KEGG: gsu:GSU2741 TetR family transcriptional regulator. (194 aa)    
Predicted Functional Partners:
Bsel_2896
KEGG: nexilin (F actin binding protein).
       0.529
Bsel_1310
Hypothetical protein; Possible subunit of a heme lyase.
  
     0.451
Bsel_0965
PFAM: Protein of unknown function DUF1980; KEGG: dal:Dalk_1553 membrane protein-like protein.
  
     0.436
Bsel_1607
PFAM: Peptidase M23; KEGG: BRD group protein.
  
     0.434
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.