STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2898PFAM: periplasmic binding protein; KEGG: dol:Dole_2060 periplasmic binding protein. (339 aa)    
Predicted Functional Partners:
Bsel_2899
PFAM: transport system permease protein; KEGG: mlo:mll1150 permease protein of ABC transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.998
Bsel_2900
Protein of unknown function DUF105; KEGG: sat:SYN_01426 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component; PFAM: protein of unknown function DUF105; ABC transporter related; SMART: AAA ATPase.
 
 
 0.998
Bsel_2818
PFAM: transport system permease protein; KEGG: asu:Asuc_1823 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.694
icmF
methylmalonyl-CoA mutase, large subunit; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
  
  
 0.615
Bsel_2819
PFAM: transport system permease protein; KEGG: msu:MS0793 BtuC protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.599
Bsel_2820
KEGG: msu:MS0794 FepC protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.556
Bsel_2821
PFAM: periplasmic binding protein; KEGG: bmc:BAbS19_II05320 periplasmic binding protein.
  
  
 0.508
Bsel_1422
Uroporphyrinogen III synthase HEM4; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
     
 0.502
Bsel_2190
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
     
 0.499
Bsel_0486
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
 
   
 0.470
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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