STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2902PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_460 lactose transport system permease protein lacG. (268 aa)    
Predicted Functional Partners:
Bsel_2904
ABC transporter related protein; KEGG: reh:H16_A2327 glycerol-3-phosphate transporter ATP-binding subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 0.994
Bsel_2903
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ara:Arad_4072 sugar ABC transporter.
 0.993
Bsel_2901
PFAM: extracellular solute-binding protein family 1; KEGG: vha:VIBHAR_06396 ABC-type sugar transport system periplasmic protein.
 
 0.988
Bsel_2502
ABC transporter related protein; KEGG: ecr:ECIAI1_1343 putative sugar transporter subunit: ATP-binding component of ABC superfamily transporter; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase.
 
 
 0.884
Bsel_0446
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL120664 putative permease component of ABC transporter.
 
 0.878
Bsel_0192
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PF00316 sugar ABC transporter, permease protein.
 
 0.875
Bsel_0414
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pct:PC1_0737 binding-protein-dependent transport systems inner membrane component.
 
 0.875
Bsel_3227
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL90124 putative transmembrane binding-protein-dependent transporter.
 
 0.875
Bsel_0324
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_06909 ABC-type sugar transport system, permease components.
 
 0.874
Bsel_0336
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ara:Arad_0127 sugar ABC transporter.
 
 0.872
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.