STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2924PFAM: globin; KEGG: protozoan/cyanobacterial globin family protein. (118 aa)    
Predicted Functional Partners:
Bsel_2224
PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mxa:MXAN_0202 amine oxidase, flavin-containing.
  
     0.572
Bsel_2925
PFAM: major facilitator superfamily MFS_1; KEGG: cja:CJA_3195 putative macrolide-efflux protein.
       0.526
Bsel_1550
Dithiol-disulfide isomerase involved in polyketide biosynthesis-like protein; KEGG: gbm:Gbem_2523 DsbA oxidoreductase.
  
  
 0.467
Bsel_0730
PFAM: cytochrome P450; KEGG: nmu:Nmul_A2167 cytochrome P450.
  
     0.450
Bsel_2923
TIGRFAM: DNA binding domain protein, excisionase family; KEGG: dvm:DvMF_1797 molybdenum cofactor synthesis domain protein.
       0.448
Bsel_2922
KEGG: sfu:Sfum_0027 extracellular solute-binding protein.
       0.411
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.