STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_2938PFAM: transferase hexapeptide repeat containing protein; KEGG: ebr:ECB_00410 maltose O-acetyltransferase. (190 aa)    
Predicted Functional Partners:
Bsel_2937
KEGG: esa:ESA_03275 DNA-binding transcriptional regulator AraC; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain.
  
  
 0.621
Bsel_3047
PFAM: sugar transferase; KEGG: fph:Fphi_1244 galactosyl transferase.
  
  
 0.485
Bsel_2936
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: amc:MADE_00428 twin-arginine translocation pathway signal.
  
  
 0.477
Bsel_2935
PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; Oxidoreductase domain; KEGG: rhi:NGR_b19940 putative oxidoreductase.
  
  
 0.470
Bsel_2933
PFAM: oxidoreductase domain protein; Semialdehyde dehydrogenase NAD - binding; homoserine dehydrogenase NAD-binding; Oxidoreductase domain; KEGG: apl:APL_1180 oxidoreductase.
  
  
 0.440
Bsel_3039
PFAM: polysaccharide biosynthesis protein; multi antimicrobial extrusion protein MatE; KEGG: spl:Spea_1408 polysaccharide biosynthesis protein.
 
  
 0.427
Bsel_2934
PFAM: Xylose isomerase domain protein TIM barrel; AP endonuclease 2 domain protein; KEGG: ara:Arad_0117 hypothetical protein.
  
  
 0.423
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.