STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_3071PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; S-layer domain protein; KEGG: gsu:GSU2075 subtilisin; Belongs to the peptidase S8 family. (642 aa)    
Predicted Functional Partners:
Bsel_0947
KEGG: dal:Dalk_3426 regulator of chromosome condensation RCC1; PFAM: Ig domain protein group 2 domain protein; glycoside hydrolase family 13 domain protein; regulator of chromosome condensation RCC1; SMART: Ig domain protein group 2 domain protein.
 
 
 0.609
Bsel_3072
KEGG: hypothetical protein; PFAM: S-layer domain protein; SMART: Lysozyme subfamily 2.
 
    
0.575
Bsel_3070
Hypothetical protein.
       0.533
Bsel_0810
PFAM: S-layer domain protein; Fibronectin type III domain protein; KEGG: hypothetical protein.
 
 
0.529
Bsel_0660
PFAM: NHL repeat containing protein; KEGG: gbm:Gbem_2063 NHL repeat containing protein.
 
 
 0.506
Bsel_0830
PFAM: Fibronectin type III domain protein; KEGG: dal:Dalk_0547 fibronectin type III domain protein.
  
  
 0.500
Bsel_0716
Hypothetical protein; KEGG: sde:Sde_3023 endoglucanase-like.
 
 
 0.491
Bsel_0943
PFAM: SCP-like extracellular; KEGG: scl:sce1577 putative beta-galactosidase.
  
     0.478
Bsel_3069
PFAM: NLP/P60 protein; S-layer domain protein; KEGG: hhe:HH1821 hypothetical protein.
 
   
0.413
Bsel_0885
PFAM: copper amine oxidase domain protein; SCP-like extracellular; KEGG: noc:Noc_1373 hypothetical protein.
  
     0.406
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.