STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_3080PFAM: Mur ligase middle domain protein; KEGG: fph:Fphi_1486 putative capsule biosynthesis protein. (393 aa)    
Predicted Functional Partners:
Bsel_3079
KEGG: fph:Fphi_1487 capsule biosynthesis protein CapC.
 
  
 0.937
Bsel_3078
PFAM: Capsule synthesis protein, CapA; KEGG: gsu:GSU0036 capsule biosynthesis protein, putative.
 
   
 0.889
Bsel_3077
PFAM: gamma-glutamyltranspeptidase; KEGG: vsp:VS_3081 gamma-glutamyltranspeptidase.
 
   
 0.861
Bsel_0859
Hypothetical protein; KEGG: fph:Fphi_1487 capsule biosynthesis protein CapC.
 
  
 0.810
murG
Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
  
  
 0.741
divIB
Cell division protein FtsQ; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
  
  
 0.731
Bsel_0858
PFAM: Capsule synthesis protein, CapA; KEGG: cja:CJA_1179 putative capsule biosynthesis protein CapA.
 
   
 0.682
Bsel_0708
D-alanine--D-alanine ligase domain protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
 
  
 0.642
murC
UDP-N-acetylmuramate/alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
  
  
 0.641
Bsel_1651
PFAM: cytoplasmic peptidoglycan synthetase domain protein; KEGG: hypothetical protein.
  
  
 0.586
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.