STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_3107PFAM: coenzyme A transferase; KEGG: bpt:Bpet3678 putative glutaconate CoA transferase subunit A. (278 aa)    
Predicted Functional Partners:
Bsel_3106
PFAM: coenzyme A transferase; KEGG: bxe:Bxe_B1889 putative glutaconate CoA-transferase, subunit B.
 
 0.999
Bsel_2000
PFAM: Amidase; KEGG: dol:Dole_2535 amidase; Belongs to the amidase family.
  
  
  0.912
Bsel_0573
PFAM: Amidase; KEGG: hypothetical protein LOC100240917; Belongs to the amidase family.
     
  0.900
Bsel_2620
PFAM: Amidase; KEGG: ilo:IL1971 amidase.
     
  0.900
Bsel_3109
PFAM: extracellular solute-binding protein family 1; KEGG: bvi:Bcep1808_5293 extracellular solute-binding protein.
 
     0.856
Bsel_3116
PFAM: microcompartments protein; KEGG: yen:YE2736 putative propanediol utilization protein: polyhedral bodies.
 
     0.854
Bsel_3114
PFAM: microcompartments protein; KEGG: aha:AHA_1335 microcompartments family protein.
 
     0.811
Bsel_3118
PFAM: class II aldolase/adducin family protein; KEGG: sfu:Sfum_2465 class II aldolase/adducin family protein.
 
     0.778
Bsel_3111
Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.
     
 0.773
Bsel_3115
PFAM: microcompartments protein; KEGG: aha:AHA_1336 microcompartments family protein.
 
     0.765
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.