STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_3134KEGG: hypothetical protein LOC691864. (146 aa)    
Predicted Functional Partners:
Bsel_0665
KEGG: hypothetical protein.
  
     0.759
Bsel_1258
Small secreted protein-like protein.
  
     0.748
Bsel_1429
KEGG: hypothetical protein.
  
     0.739
Bsel_1247
Hypothetical protein.
  
     0.718
Bsel_1363
Hypothetical protein.
  
     0.715
Bsel_1617
PFAM: Protein of unknown function DUF2197.
  
     0.703
Bsel_1834
PFAM: Resolvase domain; KEGG: eta:ETA_pET460080 resolvase.
  
     0.693
Bsel_1414
Hypothetical protein.
  
     0.663
Bsel_1745
TIGRFAM: flagellar export protein FliJ; KEGG: bba:Bd3400 flagellar basal body formation protein FliJ.
  
     0.658
Bsel_3135
KEGG: xac:XAC1981 flagellar basal body rod protein FlgG; TIGRFAM: fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein.
       0.656
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.