STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_3170KEGG: bpy:Bphyt_4054 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight. (217 aa)    
Predicted Functional Partners:
Bsel_3168
TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; KEGG: ribose 5-phosphate isomerase B family protein; K01808 ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase.
 
    0.804
Bsel_0440
KEGG: hha:Hhal_1932 beta-lactamase domain-containing protein; PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein.
  
 
 0.707
Bsel_0649
Beta-lactamase domain protein; KEGG: dat:HRM2_35830 putative metallo-beta-lactamase superfamily protein; PFAM: beta-lactamase domain protein; Rhodanese domain protein; SMART: Rhodanese domain protein.
  
 
 0.707
mcsB
ATP:guanido phosphotransferase; Catalyzes the specific phosphorylation of arginine residues in proteins.
  
  
 0.685
Bsel_0081
PFAM: UvrB/UvrC protein.
  
   
 0.666
Bsel_3171
Sua5/YciO/YrdC/YwlC family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
       0.601
Bsel_2220
KEGG: hsm:HSM_1286 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight.
  
     0.562
Bsel_3169
KEGG: glo:Glov_3335 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein.
       0.557
Bsel_3167
Conserved hypothetical protein; Belongs to the UPF0340 family.
       0.553
Bsel_1271
Hypothetical protein.
  
 
 0.548
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.