STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_3192PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: sat:SYN_02638 iron-sulphur-binding reductase. (707 aa)    
Predicted Functional Partners:
Bsel_1140
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: mxa:MXAN_5136 3-hydroxyacyl-CoA dehydrogenase.
 
  
 0.748
Bsel_3190
KEGG: dat:HRM2_10050 3-hydroxyacyl-CoA dehydrogenase (beta-hydroxybutyryl-CoA dehydrogenase) (BhbD); PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein.
 
  
 0.650
lutB
Iron-sulfur cluster binding protein; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate.
  
 
 0.646
Bsel_1395
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: sat:SYN_02636 electron transfer flavoprotein beta-subunit.
 
  
 0.631
lutC
Protein of unknown function DUF162; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source.
  
 
 0.616
Bsel_1393
PFAM: Tetracycline transcriptional regulator YsiA domain protein; regulatory protein TetR; KEGG: sfu:Sfum_1401 TetR family transcriptional regulator.
 
  
 0.556
Bsel_3191
TIGRFAM: acetyl-CoA acetyltransferase; KEGG: bgl:bglu_1g14720 thiolase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.546
icmF
methylmalonyl-CoA mutase, large subunit; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
 
     0.541
Bsel_1396
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: sat:SYN_02637 electron transfer flavoprotein alpha-subunit.
 
  
 0.521
Bsel_2113
Cytochrome b subunit of the bc complex-like protein; Component of the menaquinol-cytochrome c reductase complex.
 
  
 0.508
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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