STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_3205KEGG: bph:Bphy_4506 XRE family transcriptional regulator; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein. (182 aa)    
Predicted Functional Partners:
Bsel_3206
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: pca:Pcar_0906 putative ATP-binding component of dipeptide transport system; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
       0.789
Bsel_3207
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: dde:Dde_1182 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
       0.774
Bsel_3208
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ara:Arad_12354 oligopeptide ABC transporter (permease).
   
   0.759
Bsel_3209
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ara:Arad_12353 oligopeptide ABC transporter (permease).
     
 0.692
Bsel_2845
PFAM: Silent information regulator protein Sir2; KEGG: aeh:Mlg_2040 silent information regulator protein Sir2.
  
    0.552
Bsel_0177
Transcriptional regulator, GntR family; KEGG: bmt:BSUIS_B1410 hypothetical protein; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
  
  
 0.534
Bsel_0180
KEGG: mxa:MXAN_6161 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
  
  
 0.534
Bsel_1802
KEGG: bgl:bglu_1g29010 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; SMART: regulatory protein GntR HTH.
  
  
 0.534
Bsel_2569
Transcriptional regulator, GntR family; KEGG: esa:ESA_02618 DNA-binding transcriptional repressor MngR; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
  
  
 0.534
Bsel_2744
Transcriptional regulator, GntR family; TIGRFAM: trehalose operon repressor; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; KEGG: cvi:CV_3302 transcriptional repressor of the trehalose operon; SMART: regulatory protein GntR HTH.
  
  
 0.534
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.