STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_3206TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: pca:Pcar_0906 putative ATP-binding component of dipeptide transport system; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (348 aa)    
Predicted Functional Partners:
Bsel_3208
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ara:Arad_12354 oligopeptide ABC transporter (permease).
 
 0.992
Bsel_0020
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sat:SYN_01342 oligopeptide transport system permease protein.
 
 0.984
Bsel_3209
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ara:Arad_12353 oligopeptide ABC transporter (permease).
 
 
 0.983
Bsel_3269
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpe:BP2394 putative binding-protein-dependent transport permease.
 
 0.967
Bsel_3270
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_1184 dipeptide ABC transporter, permease protein.
 
 
 0.955
Bsel_0963
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_3104 binding-protein-dependent transport systems inner membrane component.
 
 
 0.954
Bsel_0962
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_0628 binding-protein-dependent transport systems inner membrane component.
 
 0.952
Bsel_0019
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_3319 binding-protein-dependent transport systems inner membrane component.
 
 
 0.943
Bsel_3207
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: dde:Dde_1182 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
  
0.932
ecfT
Cobalt transport protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
 
 0.924
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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