STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_3217Hypothetical protein; Belongs to the UPF0741 family. (79 aa)    
Predicted Functional Partners:
Bsel_2436
PFAM: peptidase U32; KEGG: gme:Gmet_0888 peptidase U32.
  
     0.724
Bsel_2186
PFAM: protein of unknown function DUF309; KEGG: dvm:DvMF_2231 protein of unknown function DUF309.
  
     0.684
Bsel_2435
PFAM: peptidase U32; KEGG: geo:Geob_1554 peptidase U32.
  
     0.657
Bsel_3183
PFAM: Protein of unknown function DUF2529.
  
     0.621
Bsel_1941
KEGG: ebr:ECB_00737 hypothetical protein.
  
     0.602
Bsel_2764
PFAM: YfkB-like domain protein; Radical SAM domain protein; KEGG: sat:SYN_02266 radical SAM superfamily protein.
  
     0.602
Bsel_2239
KEGG: hypothetical protein.
  
     0.586
Bsel_2296
KEGG: nmu:Nmul_A1629 putative transcriptional regulator.
  
     0.579
Bsel_3214
PFAM: Protein of unknown function YwhD.
 
     0.568
Bsel_1714
PFAM: protein of unknown function DUF1128; Belongs to the UPF0435 family.
  
     0.559
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.