STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_3243PFAM: LmbE family protein; KEGG: pla:Plav_1416 LmbE family protein. (224 aa)    
Predicted Functional Partners:
Bsel_3242
Hypothetical protein.
 
    0.978
bshC
Protein of unknown function UCP012535; Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH.
 
  
 0.726
Bsel_2105
PFAM: glycosyl transferase group 1; KEGG: hypothetical protein.
 
 
 0.715
Bsel_1522
KEGG: vap:Vapar_0701 hypothetical protein; TIGRFAM: cytochrome c oxidase assembly factor CtaG; PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related.
  
     0.602
Bsel_2747
KEGG: hypothetical protein.
  
     0.537
Bsel_2297
Hypothetical protein.
  
     0.484
Bsel_1183
Hypothetical protein.
  
     0.465
Bsel_2140
Hypothetical protein.
  
     0.465
Bsel_3241
KEGG: aha:AHA_3207 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein.
       0.449
Bsel_1630
Hypothetical protein.
  
     0.416
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.