STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_0042PFAM: Extracellular ligand-binding receptor; KEGG: bms:BR0014 branched-chain amino acid ABC transporter, perisplasmic amino acid-binding protein, putative. (368 aa)    
Predicted Functional Partners:
Oant_1113
PFAM: inner-membrane translocator; KEGG: bmb:BruAb1_1771 branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.876
Oant_4422
PFAM: inner-membrane translocator; KEGG: rde:RD1_0856 branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.872
Oant_1112
PFAM: inner-membrane translocator; KEGG: bms:BR1791 branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.863
Oant_4423
PFAM: inner-membrane translocator; KEGG: sil:SPOA0299 branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.857
Oant_4421
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sil:SPOA0297 branched-chain amino acid ABC transporter, ATP-binding protein.
 
  
 0.848
Oant_1114
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bms:BR1789 branched-chain amino acid ABC transporter, ATP-binding protein.
 
  
 0.842
Oant_1399
PFAM: inner-membrane translocator; KEGG: bmb:BruAb2_0277 branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.833
Oant_1115
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb1_1769 branched-chain amino acid ABC transporter, ATP-binding protein.
 
  
 0.827
Oant_4420
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rde:RD1_0859 branched-chain amino acid ABC transporter, ATP-binding protein.
 
  
 0.822
Oant_4399
PFAM: inner-membrane translocator; KEGG: vei:Veis_4209 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.816
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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