STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_0054PFAM: protein of unknown function DUF490; KEGG: bmb:BruAb1_0049 hypothetical protein. (1578 aa)    
Predicted Functional Partners:
Oant_0053
PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: bms:BR0048 putative outer membrane protein.
 
 
 0.996
Oant_0055
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bmb:BruAb1_0050 lipoprotein, hypothetical.
 
     0.606
Oant_1654
PFAM: protein of unknown function DUF1058; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: bms:BR1511 hypothetical protein.
  
     0.501
Oant_0441
PFAM: Invasion associated locus B family protein; KEGG: bmb:BruAb1_0366 invasion protein B.
  
     0.469
Oant_3924
PFAM: AsmA family protein; KEGG: bmb:BruAb1_1595 AsmA family protein.
  
   
 0.462
Oant_0977
KEGG: bms:BR1885 hypothetical protein.
  
     0.458
Oant_2682
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: bmb:BruAb1_0599 hypothetical peptidoglycan-binding protein.
  
     0.444
Oant_0928
PFAM: outer membrane lipoprotein omp19; KEGG: bmb:BruAb1_1906 Omp19, lipoprotein Omp19.
  
     0.431
Oant_2111
KEGG: bmf:BAB1_1043 hypothetical protein.
  
     0.425
Oant_1179
PFAM: Invasion associated locus B family protein; KEGG: bmb:BruAb1_0366 invasion protein B.
  
     0.417
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.