STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_0100PFAM: protein of unknown function UPF0005; KEGG: bmb:BruAb1_0086 hypothetical membrane protein; Belongs to the BI1 family. (260 aa)    
Predicted Functional Partners:
Oant_0101
PFAM: GCN5-related N-acetyltransferase; KEGG: bms:BR0089 phosphinothricin N-acetyltransferase.
       0.586
yidC
60 kDa inner membrane insertion protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
 
     0.508
htpX
PFAM: peptidase M48 Ste24p; KEGG: bms:BR1813 heat shock protein HtpX; Belongs to the peptidase M48B family.
  
  
 0.497
Oant_0098
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb1_0084 ABC transporter, ATP-binding protein.
       0.495
Oant_0099
PFAM: protein of unknown function DUF214; KEGG: bmb:BruAb1_0085 ABC transporter, permease protein.
       0.495
Oant_0846
PFAM: import inner membrane translocase subunit Tim44; KEGG: bms:BR2074 hypothetical protein.
  
  
 0.473
Oant_1175
PFAM: protein of unknown function DUF1013; KEGG: bmb:BruAb1_1722 hypothetical protein.
  
     0.465
msrB
TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: bms:BRA0446 PilB-related protein.
  
   0.403
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.