STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_0102KEGG: bmb:BruAb1_0088 hypothetical protein. (130 aa)    
Predicted Functional Partners:
Oant_0327
KEGG: bmb:BruAb1_0281 hypothetical protein.
  
     0.733
Oant_1575
PFAM: protein of unknown function DUF1153; KEGG: bmb:BruAb1_1580 hypothetical protein.
  
     0.709
Oant_0148
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bmb:BruAb1_0130 sensor histidine kinase.
  
     0.677
Oant_2157
PFAM: nitrogen-fixing NifU domain protein; KEGG: bmb:BruAb1_1079 NifU-related protein.
  
     0.656
Oant_3636
TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region; KEGG: bms:BRA0574 hypothetical protein.
 
     0.651
Oant_0393
PFAM: GcrA cell cycle regulator; KEGG: bmb:BruAb1_0325 hypothetical protein.
  
     0.641
Oant_0151
PFAM: protein of unknown function DUF1052; KEGG: bms:BR0138 hypothetical protein.
  
     0.629
Oant_0399
PFAM: 2-deoxycytidine 5-triphosphate deaminase; KEGG: bmb:BruAb1_0332 dCTP deaminase.
  
     0.626
Oant_2623
KEGG: bmb:BruAb1_0683 hypothetical protein.
  
     0.605
Oant_3048
KEGG: bmb:BruAb2_0213 hypothetical protein.
  
     0.600
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.