STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_0141S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. (293 aa)    
Predicted Functional Partners:
Oant_0144
TIGRFAM: Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bme:BMEI1819 alcohol dehydrogenase class III; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
 0.999
Oant_3453
TIGRFAM: Formaldehyde dehydrogenase glutathione-independent; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: atc:AGR_C_2885 hypothetical protein.
  
 
 0.913
Oant_2862
PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: sme:SMa0002 probable FdoG formate dehydrogenase-O alpha subunit.
  
 
  0.901
Oant_2863
TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: sme:SMa0002 probable FdoG formate dehydrogenase-O alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
  0.901
Oant_2864
TIGRFAM: formate dehydrogenase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Formate dehydrogenase transmembrane domain protein; KEGG: sme:SMa0005 probable FdoH formate dehydrogenase-O, beta subunit.
     
  0.900
Oant_2865
TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: sme:SMa0007 probable FdoI formate dehydrogenase-O,gamma subunit.
     
  0.900
Oant_0145
PFAM: protein of unknown function DUF156; KEGG: bms:BR0131 hypothetical protein.
  
  
 0.838
Oant_0143
PFAM: GCN5-related N-acetyltransferase; KEGG: bms:BR0129 acetyltransferase, GNAT family.
       0.800
Oant_0142
PFAM: protein of unknown function DUF1345; KEGG: bms:BR0128 hypothetical protein.
       0.790
Oant_3942
PFAM: protein of unknown function DUF156; KEGG: nha:Nham_2648 protein of unknown function DUF156.
  
  
 0.565
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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