STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_0146PFAM: GCN5-related N-acetyltransferase; KEGG: pau:PA14_45980 putative acetyltransferase. (147 aa)    
Predicted Functional Partners:
Oant_0145
PFAM: protein of unknown function DUF156; KEGG: bms:BR0131 hypothetical protein.
 
     0.671
Oant_0147
TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent domain protein; SMART: DEAD-like helicases; KEGG: mlo:mlr5306 ATP-dependent helicase.
       0.559
Oant_0143
PFAM: GCN5-related N-acetyltransferase; KEGG: bms:BR0129 acetyltransferase, GNAT family.
     
 0.558
Oant_0141
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
       0.532
Oant_0142
PFAM: protein of unknown function DUF1345; KEGG: bms:BR0128 hypothetical protein.
       0.527
Oant_0144
TIGRFAM: Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bme:BMEI1819 alcohol dehydrogenase class III; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
       0.527
Oant_1605
PFAM: GCN5-related N-acetyltransferase; KEGG: bms:BR1560 acetyltransferase, GNAT family.
 
     0.503
Oant_1615
PFAM: GCN5-related N-acetyltransferase; KEGG: bms:BR1551 acetyltransferase, GNAT family.
 
     0.425
Oant_3517
PFAM: GCN5-related N-acetyltransferase; KEGG: bch:Bcen2424_5366 GCN5-related N-acetyltransferase.
 
     0.415
Oant_0148
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bmb:BruAb1_0130 sensor histidine kinase.
       0.412
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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