STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_0248KEGG: pde:Pden_0367 hypothetical protein. (133 aa)    
Predicted Functional Partners:
Oant_0246
TIGRFAM: phage head-tail adaptor, putative; KEGG: sit:TM1040_1666 hypothetical protein.
   
   0.952
Oant_0243
TIGRFAM: phage portal protein, HK97 family; PFAM: phage portal protein; KEGG: ecs:ECs1544 putative portal protein.
 
 
   0.937
Oant_0247
TIGRFAM: phage protein, HK97 gp10 family; KEGG: pde:Pden_0997 phage protein, HK97 GP10 family.
 
     0.911
Oant_0240
KEGG: ecs:ECs2250 putative major head protein/prohead protease.
   
   0.818
Oant_0244
KEGG: ecs:ECs1975 hypothetical protein.
       0.773
Oant_0245
TIGRFAM: uncharacterized phage protein (possible DNA packaging); KEGG: ecs:ECs1545 hypothetical protein.
       0.773
Oant_0241
Hypothetical protein.
       0.746
Oant_0242
Hypothetical protein.
       0.746
Oant_0257
KEGG: bms:BR0980 hypothetical protein.
   
   0.699
Oant_2296
Hypothetical protein.
   
   0.686
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.