STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_0293PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: pde:Pden_4846 periplasmic binding protein/LacI transcriptional regulator. (343 aa)    
Predicted Functional Partners:
Oant_4112
Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
   
 
 0.819
Oant_4277
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: bms:BRA0054 glutamate synthase, large subunit.
    
 
 0.783
Oant_2762
Alanine racemase; PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: sme:SMb20977 putative transcriptional regulator, LacI family protein.
  
     0.760
Oant_3460
PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: mlo:mlr3320 transcription regulator.
  
     0.715
Oant_2811
PFAM: regulatory protein LacI; KEGG: sme:SMb20483 putative catabolite repressor protein.
  
     0.668
Oant_0289
PFAM: PfkB domain protein; KEGG: sme:SMb21374 putative sugar kinase, PfkB family protein.
 
  
 0.646
Oant_0288
Tagatose-6-phosphate kinase; PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ; KEGG: mlo:mll7215 probable tagatose 6-phosphate kinase agaZ.
 
     0.511
Oant_0292
Monosaccharide-transporting ATPase; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb21377 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor.
 
    0.452
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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