STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_0313PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bmb:BruAb1_0234 mandelate racemase/muconate lactonizing enzyme family protein. (371 aa)    
Predicted Functional Partners:
Oant_0314
PFAM: protein of unknown function DUF718; KEGG: bmb:BruAb1_0235 hypothetical protein.
 
   
 0.931
Oant_0315
PFAM: oxidoreductase domain protein; KEGG: bms:BR0241 oxidoreductase, Gfo/Idh/MocA family.
 
     0.905
Oant_0311
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0237 sugar ABC transporter, permease protein.
 
     0.845
Oant_0310
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb1_0231 sugar ABC transporter, permease protein.
 
     0.844
Oant_0317
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mes:Meso_3546 short-chain dehydrogenase/reductase SDR.
 
     0.830
Oant_0316
PFAM: MaoC domain protein dehydratase; KEGG: sme:SMb21110 putative MaoC-like (monoamine oxidase-like) protein, similar to NodN.
 
     0.821
Oant_0307
PFAM: amidohydrolase 2; KEGG: bme:BMEI1718 purine/pyrimidine phosphoribosyl transferase.
 
   
 0.817
Oant_0312
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bms:BR0238 sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.777
Oant_0309
PFAM: extracellular solute-binding protein family 1; KEGG: bmb:BruAb1_0230 sugar ABC transporter, periplasmic sugar-binding protein.
 
     0.755
Oant_0308
PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bms:BR0234 transcriptional regulator, IclR family.
 
     0.680
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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