STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_0348TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; KEGG: bmf:BAB1_0310 peptidase M20/M25/M40. (415 aa)    
Predicted Functional Partners:
Oant_0347
TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bms:BR0278 D-hydantoinase.
 
 
 0.994
Oant_0365
TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate dehydrogenase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bmb:BruAb1_0308 dihydropyrimidine dehydrogenase.
 
 0.988
Oant_0366
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bme:BMEI1638 glutamate synthase (NADPH) small chain.
 
 
 0.932
Oant_1286
PFAM: aldehyde dehydrogenase; KEGG: bms:BRA1014 aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
    
 0.805
Oant_1459
PFAM: aldehyde dehydrogenase; KEGG: bms:BRA0908 aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
    
 0.805
Oant_2836
PFAM: aldehyde dehydrogenase; KEGG: atc:AGR_L_75 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.805
Oant_3782
PFAM: aldehyde dehydrogenase; KEGG: bmb:BruAb2_0555 aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
    
 0.805
Oant_0349
PFAM: regulatory protein TetR; Tetracycline transcriptional regulator YcdC domain protein; KEGG: bmb:BruAb1_0306 transcriptional regulator, TetR family.
 
     0.752
Oant_0343
PFAM: NMT1/THI5 like domain protein; KEGG: sme:SMc01827 hypothetical protein.
 
     0.713
Oant_0346
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_C_4331 putative ABC-transport protein, ATP-binding component.
 
     0.711
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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