STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_0352PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01979 putative sugar transport system permease ABC transporter protein. (277 aa)    
Predicted Functional Partners:
Oant_0353
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL110365 putative permease component of ABC transporter.
 
 0.968
Oant_0351
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ret:RHE_PE00248 probable sugar ABC transporter, ATP-binding protein.
   0.955
Oant_0354
PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMc01977 putative sugar-binding periplasmic ABC transporter protein.
 
   0.932
Oant_0363
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_C_4555 hypothetical protein.
 
  
 
0.931
Oant_0362
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_C_4553 putative multiple sugar transport system permease protein.
 
 0.880
Oant_3896
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0749 sugar ABC transporter, permease protein, putative.
 
 0.863
Oant_0310
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb1_0231 sugar ABC transporter, permease protein.
 
 0.858
Oant_0639
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_C_686 ABC transporter sugar permease.
 
 0.851
Oant_2941
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0305 sugar ABC transporter, permease protein.
 
 0.850
Oant_1668
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA1182 sugar ABC transporter, permease protein, putative.
 
 0.844
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.