STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_0360Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: atc:AGR_C_4549 hypothetical protein. (220 aa)    
Predicted Functional Partners:
Oant_0361
PFAM: extracellular solute-binding protein family 1; KEGG: atc:AGR_C_4552 putative multiple sugar transport system substrate-binding protein.
 
     0.789
Oant_0359
PFAM: dihydrodipicolinate synthetase; KEGG: atc:AGR_C_4548 hypothetical protein; Belongs to the DapA family.
 
     0.755
Oant_2937
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bja:blr7971 transcriptional regulatory protein.
  
     0.713
Oant_3096
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMb20773 putative transcriptional regulator, GntR family protein.
  
     0.699
Oant_3952
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mlo:mlr8380 hypothetical protein.
  
     0.696
Oant_3335
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: oih:OB2847 transcriptional regulator.
  
     0.689
Oant_4021
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: reu:Reut_C6220 regulatory protein GntR, HTH:GntR, C-terminal.
  
     0.686
Oant_2798
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pfl:PFL_4301 transcriptional regulator, GntR family.
  
     0.656
Oant_0363
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_C_4555 hypothetical protein.
 
     0.640
Oant_1285
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bme:BMEII0281 transcriptional regulator, GntR family.
  
     0.622
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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