STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_0364PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: atc:AGR_C_4558 probable ABC transporter ATP-binding protein Y4OS; Belongs to the ABC transporter superfamily. (352 aa)    
Predicted Functional Partners:
Oant_0362
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_C_4553 putative multiple sugar transport system permease protein.
 
   0.952
Oant_0363
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_C_4555 hypothetical protein.
 
 0.949
Oant_3853
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csa:Csal_0634 binding-protein-dependent transport systems inner membrane component.
 
  0.912
Oant_3455
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL2795 putative transmembrane component of ABC transporter.
  
  0.911
Oant_3852
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_01296 ABC-type sugar transport system, permease component.
 
 0.911
Oant_3548
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb2_0704 sugar ABC transporter, permease protein.
 
  0.908
Oant_3547
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb2_0705 sugar ABC transporter, permease protein.
 
  0.899
Oant_3456
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_2945 probable permease of ABC sugar transporter.
 
  0.896
Oant_3816
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0692 sugar ABC transporter, permease protein, putative.
  
  0.891
Oant_3815
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0691 sugar ABC transporter, permease protein, putative.
 
  0.890
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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