STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_0435KEGG: bpm:BURPS1710b_A0077 predicted transcriptional regulator. (199 aa)    
Predicted Functional Partners:
Oant_3832
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bmb:BruAb2_0522 AhpC, alkyl hydroperoxide reductase C.
  
    0.533
Oant_0434
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
       0.508
Oant_0792
PFAM: protein of unknown function DUF925; KEGG: mlo:mll5052 hypothetical protein.
  
     0.465
fur
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: bmb:BruAb1_2147 ferric uptake regulator family protein; Belongs to the Fur family.
  
    0.445
fur-2
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: bmb:BruAb1_1641 hypothetical ferric uptake regulation protein; Belongs to the Fur family.
  
    0.445
Oant_4179
KEGG: bmb:BruAb2_1062 transcriptional regulator, Fur family; Belongs to the Fur family.
  
    0.445
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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