STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_0484PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: bmf:BAB1_0401 tetracycline resistance protein:major facilitator superfamily (MFS). (400 aa)    
Predicted Functional Partners:
Oant_0485
PFAM: SbmABacA family protein; ABC transporter domain protein; KEGG: bmb:BruAb1_0398 BacA, bacteroid development protein.
 
     0.625
Oant_1892
PFAM: Extracellular ligand-binding receptor; KEGG: bmb:BruAb1_1294 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, hypothetical.
  
     0.549
Oant_0483
KEGG: mlo:mll3729 hypothetical protein.
       0.506
Oant_1721
KEGG: bmb:BruAb1_1447 hypothetical protein.
  
     0.474
Oant_0409
Integral membrane sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bms:BR0316 sensor histidine kinase/response regulator.
 
  
 0.472
Oant_4228
PFAM: extracellular solute-binding protein family 1; KEGG: bmb:BruAb2_0113 ABC transporter, periplasmic substrate-binding protein.
 
    0.426
Oant_0482
PFAM: regulatory protein ArsR; KEGG: ret:RHE_CH01412 probable transcriptional regulator protein, ArsR family.
  
    0.425
Oant_0481
KEGG: rle:RL1169 conserved hypothethetical protein.
  
    0.418
Oant_1677
PFAM: NUDIX hydrolase; KEGG: bmb:BruAb1_1485 MutT/nudix family protein.
  
     0.412
aqpZ
MIP family channel protein; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
  
 0.404
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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