STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_0606TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bmb:BruAb1_0514 hydrolase, haloacid dehalogenase-like family. (204 aa)    
Predicted Functional Partners:
Oant_3595
PFAM: alpha/beta hydrolase fold; KEGG: pau:PA14_37530 putative hydrolase.
  
 
 0.911
Oant_1286
PFAM: aldehyde dehydrogenase; KEGG: bms:BRA1014 aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
   
 
  0.900
Oant_1459
PFAM: aldehyde dehydrogenase; KEGG: bms:BRA0908 aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
   
 
  0.900
Oant_2700
TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bmb:BruAb1_0587 haloacid dehalogenase.
     
  0.900
Oant_2836
PFAM: aldehyde dehydrogenase; KEGG: atc:AGR_L_75 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.900
Oant_3782
PFAM: aldehyde dehydrogenase; KEGG: bmb:BruAb2_0555 aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
   
 
  0.900
Oant_0607
A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
     
 0.805
Oant_0611
PFAM: protein of unknown function DUF1159; KEGG: bms:BR0494 hypothetical protein.
       0.581
Oant_0610
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rfr:Rfer_0656 NAD-dependent epimerase/dehydratase.
  
    0.533
Oant_0609
PFAM: O-antigen polymerase; KEGG: mes:Meso_1374 O-antigen polymerase.
       0.532
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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