STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_0642TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ret:RHE_CH02748 putative hydrolase protein. (255 aa)    
Predicted Functional Partners:
Oant_0641
PFAM: metallophosphoesterase; KEGG: bms:BRA1184 purple acid phosphatase family protein.
  
  
 0.610
Oant_0639
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_C_686 ABC transporter sugar permease.
  
    0.544
Oant_0638
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_C_688 probable sugar transport inner membrane protein.
       0.532
Oant_0640
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rpd:RPD_3148 ABC transporter related; Belongs to the ABC transporter superfamily.
       0.532
Oant_2365
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bmb:BruAb1_0873 hydrolase, haloacid dehalogenase-like family.
  
   
 0.490
Oant_0637
PFAM: extracellular solute-binding protein family 1; KEGG: atc:AGR_C_689 glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein.
       0.453
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.