STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_0664PFAM: Uncharacterized protein UPF0065; KEGG: bbr:BB0335 hypothetical protein. (320 aa)    
Predicted Functional Partners:
Oant_0662
PFAM: protein of unknown function DUF112 transmembrane; KEGG: bja:bll0952 hypothetical protein.
 
  
 0.968
Oant_3100
PFAM: protein of unknown function DUF112 transmembrane; KEGG: sme:SMb20769 hypothetical protein.
 
  
 0.867
Oant_3421
PFAM: protein of unknown function DUF112 transmembrane; KEGG: rle:RL3889 putative transmembrane protein.
 
  
 0.867
Oant_3919
PFAM: protein of unknown function DUF112 transmembrane; KEGG: mes:Meso_3315 protein of unknown function DUF112, transmembrane.
 
  
 0.867
Oant_0663
KEGG: bja:blr4372 hypothetical protein.
       0.773
Oant_3098
PFAM: Uncharacterized protein UPF0065; KEGG: sme:SMb20771 hypothetical protein.
  
     0.771
Oant_0667
PFAM: regulatory protein IclR; Helix-turn-helix type 11 domain protein; Transcriptional regulator IclR; KEGG: mes:Meso_2367 transcriptional regulator, IclR family.
 
    0.648
Oant_0665
Threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: mlo:mll9542 threonine synthase homolog.
       0.605
Oant_0666
PFAM: peptidase M24; KEGG: rpb:RPB_4421 peptidase M24.
       0.605
Oant_3422
PFAM: protein of unknown function DUF1468; KEGG: sme:SMb20026 hypothetical protein.
 
  
 0.590
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.