STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_0732PFAM: NLP/P60 protein; KEGG: bmb:BruAb1_2152 NLP/P60 family protein. (286 aa)    
Predicted Functional Partners:
Oant_0731
PFAM: regulatory protein MarR; KEGG: bms:BR2180 transcriptional regulator, putative.
       0.800
Oant_0733
PFAM: alpha/beta hydrolase fold; KEGG: bmb:BruAb1_2151 hypothetical hydrolase.
     
 0.732
Oant_0730
PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: bms:BR2181 cytosol aminopeptidase family protein.
       0.614
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
 
   
 0.574
Oant_0102
KEGG: bmb:BruAb1_0088 hypothetical protein.
  
     0.572
Oant_0409
Integral membrane sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bms:BR0316 sensor histidine kinase/response regulator.
  
  
 0.538
hisS
TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; KEGG: bms:BRA0187 histidyl-tRNA synthetase.
 
     0.521
Oant_0996
KEGG: bmb:BruAb1_1960 hypothetical protein.
 
    0.517
Oant_2623
KEGG: bmb:BruAb1_0683 hypothetical protein.
 
     0.508
Oant_0966
KEGG: bme:BMEI0065 hypothetical cytosolic protein.
 
   
 0.504
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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