STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_0733PFAM: alpha/beta hydrolase fold; KEGG: bmb:BruAb1_2151 hypothetical hydrolase. (280 aa)    
Predicted Functional Partners:
Oant_0732
PFAM: NLP/P60 protein; KEGG: bmb:BruAb1_2152 NLP/P60 family protein.
     
 0.732
Oant_0731
PFAM: regulatory protein MarR; KEGG: bms:BR2180 transcriptional regulator, putative.
       0.723
Oant_0730
PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: bms:BR2181 cytosol aminopeptidase family protein.
     
 0.547
Oant_4008
PFAM: alpha/beta hydrolase fold; KEGG: fal:FRAAL0572 putative hydrolase.
  
   
 0.515
Oant_4392
KEGG: nfa:nfa52190 putative dioxygenase.
  
     0.457
Oant_0831
PFAM: alpha/beta hydrolase fold; KEGG: nwi:Nwi_0492 alpha/beta hydrolase fold.
  
   
 0.449
Oant_1283
PFAM: Ankyrin; KEGG: bur:Bcep18194_B0071 ankyrin repeat protein.
 
 0.428
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.