STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_0782TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bms:BR2132 Mg chelatase-related protein. (510 aa)    
Predicted Functional Partners:
Oant_1028
KEGG: bms:BR1878 competence protein F, putative.
 
  
 0.815
Oant_3669
TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: bmb:BruAb2_0622 hypothetical DprA, DNA processing protein.
 
 0.795
ruvC
Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
 
   
 0.722
Oant_0895
PFAM: SMF family protein; KEGG: nar:Saro_2199 smf protein.
 
 
 0.700
Oant_2044
PFAM: ComEC/Rec2-related protein; KEGG: bms:BR1145 ComEC/Rec2 family protein, putative.
 
  
 0.579
gshB
TIGRFAM: glutathione synthetase; PFAM: glutathione synthetase domain protein; glutathione synthetase ATP-binding; RimK domain protein ATP-grasp; KEGG: bmb:BruAb1_2106 GshB, glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
       0.573
Oant_0187
PFAM: protein of unknown function UPF0102; KEGG: bmb:BruAb1_0174 hypothetical protein; Belongs to the UPF0102 family.
 
  
 0.440
Oant_2264
PFAM: peptidase M23B; KEGG: mlo:mll8577 hypothetical protein.
 
 
   0.436
Oant_2339
Peptidase M23B; PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: bmb:BruAb1_0900 peptidase, M23/M37 family.
 
 
   0.429
Oant_4215
PFAM: flagellar basal body rod protein; KEGG: bms:BRA0128 flagellar basal-body rod protein FlgF; Belongs to the flagella basal body rod proteins family.
   
   0.406
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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