STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_0791PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bme:BMEI2003 trans-1,2-dihydrobenzene-1,2-diol dehydrogenase / D-xylose 1-dehydrogenase (NADP+). (342 aa)    
Predicted Functional Partners:
Oant_0792
PFAM: protein of unknown function DUF925; KEGG: mlo:mll5052 hypothetical protein.
       0.785
Oant_0793
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rle:RL0273 putative LysR family transcriptional regulator.
       0.784
Oant_4236
PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: bms:BRA0109 oxidoreductase, Gfo/Idh/MocA family.
  
     0.668
Oant_3840
PFAM: Myo-inositol catabolism IolB domain protein; KEGG: bme:BMEII0569 iolB protein.
 
  
 0.578
Oant_3838
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bms:BRA0714 TPP-requiring enzyme IolD; Belongs to the TPP enzyme family.
 
  
 0.562
Oant_1565
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aminotransferase class-III; KEGG: bmb:BruAb1_1588 DegT/DnrJ/EryC1/StrS family protein; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.533
Oant_0794
PFAM: aldo/keto reductase; KEGG: rle:RL0272 putative aldo-keto reductase/oxidoreductase.
  
    0.521
Oant_2945
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bmb:BruAb2_0872 oxidoreductase, Gfo/Idh/MocA family.
  
     0.504
Oant_3060
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rle:pRL120389 putative GFO/IDH/MocA family oxidoreductase.
  
     0.489
Oant_3459
PFAM: oxidoreductase domain protein; KEGG: sme:SMc04253 putative oxidoreductase protein.
  
     0.463
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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