STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_0837KEGG: bmb:BruAb1_2057 hypothetical protein. (180 aa)    
Predicted Functional Partners:
hisF
Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.
       0.800
hisA
TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; KEGG: bmb:BruAb1_2059 HisA, phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.
       0.800
hisH
Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.
       0.800
hisB
PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: bmb:BruAb1_2056 HisB, imidazoleglycerol-phosphate dehydratase.
       0.744
hisE
PFAM: phosphoribosyl-ATP pyrophosphohydrolase; KEGG: bmb:BruAb1_2061 HisE, phosphoribosyl-ATP pyrophosphohydrolase.
       0.740
Oant_1232
KEGG: bms:BR1681 hypothetical protein.
  
     0.709
Oant_0820
PFAM: aminoglycoside phosphotransferase; protein of unknown function UPF0079; KEGG: bms:BR2100 conserved hypothetical protein TIGR00150.
  
     0.705
Oant_0401
KEGG: bms:BR0308 hypothetical protein.
  
     0.686
Oant_2534
KEGG: bmb:BruAb1_0776 hypothetical protein.
  
     0.675
Oant_4197
KEGG: bmb:BruAb2_1080 hypothetical MotC chemotaxis protein.
  
     0.660
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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