STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_0847PFAM: FxsA cytoplasmic membrane protein; KEGG: bmb:BruAb1_2048 BfxsA protein, hypothetical. (169 aa)    
Predicted Functional Partners:
hslV
20S proteasome A and B subunits; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.
   
    0.739
Oant_3284
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: bms:BRA0893 thioredoxin.
   
    0.739
secB
Protein-export protein SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.
  
    0.555
Oant_0846
PFAM: import inner membrane translocase subunit Tim44; KEGG: bms:BR2074 hypothetical protein.
       0.540
Oant_3353
PFAM: Amidohydrolase 3; KEGG: rme:Rmet_0005 twin-arginine translocation pathway signal.
  
    0.504
Oant_3788
PFAM: Amidohydrolase 3; KEGG: sme:SMa0101 hypothetical protein.
  
    0.504
hslU
Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.
   
    0.457
Oant_0843
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; KEGG: bms:BR2077 hypothetical protein.
       0.441
Oant_0844
PFAM: Smr protein/MutS2; KEGG: bmb:BruAb1_2051 Smr family protein.
       0.441
Oant_0845
PFAM: MltA domain protein; 3D domain protein; KEGG: bmb:BruAb1_2050 transglycosylase-related protein.
       0.441
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.