STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_0869PFAM: protein of unknown function DUF993; KEGG: bmb:BruAb1_2025 hypothetical protein. (389 aa)    
Predicted Functional Partners:
Oant_0872
Coenzyme A transferase; CoA transferase having broad substrate specificity for short- chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons. Belongs to the 3-oxoacid CoA-transferase family.
 
   
 0.700
Oant_0876
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bmb:BruAb1_2018 3-oxoacyl-(acyl-carrier protein) reductase, hypothetical.
 
    0.610
Oant_0871
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bmb:BruAb1_2023 oxidoreductase, Gfo/Idh/MocA family.
 
    0.582
Oant_0874
PFAM: aldehyde dehydrogenase; KEGG: bmb:BruAb1_2020 L-sorbosone dehydrogenase, NAD(P) dependent; Belongs to the aldehyde dehydrogenase family.
 
    0.556
Oant_0875
PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: bmb:BruAb1_2019 oxidoreductase, GMC family.
 
     0.556
Oant_0873
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bmb:BruAb1_2021 enoyl-CoA hydratase/isomerase family protein.
 
     0.541
Oant_0877
PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: bmb:BruAb1_2017 L-sorbose dehydrogenase, FAD dependent, hypothetical.
 
     0.523
Oant_0870
Alanine racemase; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bms:BR2049 transcriptional regulator, LacI family.
       0.463
Oant_1078
TIGRFAM: chorismate mutase; PFAM: Chorismate mutase; KEGG: bmb:BruAb1_1804 chorismate mutase.
  
  
 0.447
gatC
glutamyl-tRNA(Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.
  
    0.425
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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