STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_0905PFAM: protein of unknown function DUF949; KEGG: bms:BR2033 lipoprotein, putative. (412 aa)    
Predicted Functional Partners:
Oant_0904
PFAM: SirA family protein; KEGG: bmb:BruAb1_2009 hypothetical protein; Belongs to the sulfur carrier protein TusA family.
       0.800
Oant_2153
KEGG: bmb:BruAb1_1075 hypothetical protein.
  
     0.746
Oant_2545
KEGG: bmb:BruAb1_0764 hypothetical protein.
  
     0.702
Oant_1164
PFAM: protein of unknown function DUF1036; KEGG: bmb:BruAb1_1734 hypothetical protein.
  
     0.690
Oant_0173
PFAM: protein of unknown function DUF1150; KEGG: bmb:BruAb1_0158 hypothetical protein.
  
    0.675
Oant_1568
KEGG: bmb:BruAb1_1587 hypothetical protein.
  
     0.675
Oant_0580
PFAM: Invasion associated locus B family protein; KEGG: bmb:BruAb1_0488 hypothetical protein.
  
     0.641
Oant_2997
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: atc:AGR_L_2979 hypothetical protein.
 
  
 0.623
Oant_0401
KEGG: bms:BR0308 hypothetical protein.
  
     0.620
Oant_1232
KEGG: bms:BR1681 hypothetical protein.
  
    0.601
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.