STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_0986PFAM: protein of unknown function DUF218; KEGG: bme:BMEI0074 hypothetical protein. (302 aa)    
Predicted Functional Partners:
Oant_0985
PFAM: protein of unknown function DUF214; KEGG: bms:BR1996 membrane protein, putative.
 
     0.902
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
     0.834
lptD
Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
    0.753
Oant_2690
PFAM: ROSMUCR transcriptional regulator; KEGG: bms:BR0569 transcriptional regulator, Ros/MucR family.
  
     0.664
Oant_0818
TIGRFAM: Double-strand break repair protein AddB; KEGG: bmb:BruAb1_2077 hypothetical protein.
  
     0.643
Oant_1643
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bme:BMEI0492 osmolarity sensor protein EnvZ.
  
     0.641
Oant_0987
PFAM: phospholipid/glycerol acyltransferase; KEGG: bms:BR1994 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative.
 
     0.632
Oant_2599
PFAM: DNA polymerase III chi subunit HolC; KEGG: bmb:BruAb1_0709 DNA polymerase III chi subunit.
 
     0.610
Oant_2523
PFAM: SmpA/OmlA domain protein; KEGG: bms:BR0772 hypothetical protein.
  
     0.587
Oant_0487
KEGG: bmb:BruAb1_0400 hypothetical protein.
  
     0.580
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.