STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_1027PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bms:BR1879 hypothetical protein. (298 aa)    
Predicted Functional Partners:
Oant_1638
PFAM: protein of unknown function DUF185; KEGG: bms:BR1529 hypothetical protein.
  
    0.742
Oant_2569
PFAM: ETC complex I subunit conserved region; KEGG: bmb:BruAb1_0738 oxidoreductase, hypothetical.
  
     0.737
Oant_2417
NADH-quinone oxidoreductase, chain G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.
  
   
 0.706
Oant_1028
KEGG: bms:BR1878 competence protein F, putative.
  
    0.613
Oant_1340
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: bmf:BAB2_1002 NADH-ubiquinone oxidoreductase 39 kd subunit.
 
     0.592
nuoI
NADH-quinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
   
 0.580
Oant_2948
PFAM: cytochrome c class I; KEGG: sme:SMc01981 putative cytochrome c transmembrane protein.
  
  
 0.564
Oant_2086
PFAM: ATP12 ATPase; KEGG: bmb:BruAb1_1008 hypothetical protein.
  
     0.555
Oant_2277
PFAM: NADH:ubiquinone oxidoreductase 17.2 kD subunit; KEGG: bms:BR0902 NADH-ubiquinone oxidoreductase.
  
     0.531
Oant_2334
KEGG: bms:BR0893 phytoene synthase.
 
  
 0.515
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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