STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_1124PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMa1959 hypothetical protein. (416 aa)    
Predicted Functional Partners:
Oant_2928
PFAM: major facilitator superfamily MFS_1; KEGG: reh:H16_A1695 MFS transporter, DHA1 family.
  
     0.617
Oant_3490
PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2076 major facilitator superfamily (MFS_1) transporter.
  
     0.584
Oant_1125
Transcriptional regulator, HxlR family; PFAM: helix-turn-helix HxlR type; KEGG: pfl:PFL_3943 hypothetical protein.
       0.548
Oant_0795
PFAM: major facilitator superfamily MFS_1; KEGG: pae:PA3336 probable major facilitator superfamily (MFS) transporter.
  
     0.478
Oant_3866
PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_3492 major facilitator superfamily MFS_1.
  
     0.419
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.