STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_1139PFAM: peptidase M48 Ste24p; KEGG: bmb:BruAb1_1746 hypothetical peptidase. (476 aa)    
Predicted Functional Partners:
Oant_1138
PFAM: MOSC domain containing protein; KEGG: bms:BR1762 MOSC domain protein.
       0.778
Oant_2111
KEGG: bmf:BAB1_1043 hypothetical protein.
  
     0.630
Oant_0821
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bms:BR2099 sensory box histidine kinase, putative.
  
     0.579
Oant_2093
KEGG: bms:BR1011 hypothetical protein.
  
     0.566
Oant_1568
KEGG: bmb:BruAb1_1587 hypothetical protein.
  
     0.563
Oant_1191
KEGG: bmb:BruAb1_1710 hypothetical protein.
  
     0.555
Oant_2534
KEGG: bmb:BruAb1_0776 hypothetical protein.
  
     0.551
Oant_1232
KEGG: bms:BR1681 hypothetical protein.
 
     0.544
Oant_2545
KEGG: bmb:BruAb1_0764 hypothetical protein.
  
     0.505
Oant_1096
KEGG: bmb:BruAb1_1786 hypothetical protein.
  
     0.495
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.