STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_1252PFAM: PRC-barrel domain protein; KEGG: bmb:BruAb1_1649 hypothetical protein. (284 aa)    
Predicted Functional Partners:
Oant_1251
KEGG: bmb:BruAb1_1648 hypothetical protein.
 
     0.671
Oant_1244
PFAM: HWE histidine kinase; KEGG: bmb:BruAb1_1642 sensor histidine kinase, hypothetical.
 
     0.661
Oant_1246
PFAM: response regulator receiver; KEGG: bmb:BruAb1_1644 two-component response regulator.
 
    0.646
Oant_1809
KEGG: bms:BR1386 hypothetical protein.
  
     0.535
Oant_0114
PFAM: response regulator receiver; KEGG: bmb:BruAb1_0099 response regulator, hypothetical.
  
     0.518
Oant_1573
KEGG: bmb:BruAb1_1582 hypothetical protein.
  
     0.506
Oant_2565
PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: bms:BR0736 hypothetical protein.
  
     0.493
Oant_2682
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: bmb:BruAb1_0599 hypothetical peptidoglycan-binding protein.
  
     0.489
Oant_1654
PFAM: protein of unknown function DUF1058; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: bms:BR1511 hypothetical protein.
  
     0.480
Oant_2680
KEGG: bms:BR0580 hypothetical protein.
  
     0.473
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.