STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_1296TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bms:BRA1004 GGDEF domain protein. (389 aa)    
Predicted Functional Partners:
Oant_0596
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Diverse 7TM receptor extracellular region 2; Diverse 7TM receptor transmembrane region; PAS fold-3 domain protein; KEGG: bms:BR0481 sensory box/GGDEF domain/EAL domain protein.
 
 
0.660
Oant_0286
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: bms:BR0219 sensory box/GGDEF domain/EAL domain protein.
 
 
0.542
Oant_2124
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; KEGG: bmb:BruAb1_1044 sensory box histidine kinase/response regulator.
 
 
 0.531
Oant_4191
Flagellar hook-associated 3 family protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
   
 
 0.516
Oant_3822
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; KEGG: atu:Atu4628 GGDEF family protein.
 
 
0.482
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
  
    0.479
Oant_4215
PFAM: flagellar basal body rod protein; KEGG: bms:BRA0128 flagellar basal-body rod protein FlgF; Belongs to the flagella basal body rod proteins family.
  
   0.474
Oant_0409
Integral membrane sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bms:BR0316 sensor histidine kinase/response regulator.
  
 
 0.460
Oant_1297
KEGG: bms:BRA1003 hypothetical protein.
       0.455
Oant_1380
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: bms:BRA0979 GGDEF domain protein.
 
 
0.453
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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